STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3KCH8_ORENIP-type domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (1764 aa)    
Predicted Functional Partners:
prkcsh
Protein kinase C substrate 80K-H.
   
 0.688
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.688
LOC100691113
EF-hand domain-containing protein.
   
 0.688
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 0.567
LOC100691461
Calmegin.
    
 0.545
canx
Calnexin.
    
 0.545
LOC100711459
Glycogenin 1a.
     
 0.466
ENSONIP00000009261
Glycogenin-1 isoform X1.
     
 0.466
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.465
LOC100711198
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.441
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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