STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrig1Leucine-rich repeats and immunoglobulin-like domains 1. (1046 aa)    
Predicted Functional Partners:
LOC100701740
Macrophage stimulating 1 receptor a.
    
 0.950
mst1r
Macrophage stimulating 1 receptor b.
    
 0.950
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.950
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.669
lrp1b
Low density lipoprotein receptor-related protein 1Bb.
   
 
 0.646
ret
Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.
   
 0.642
adamts9
ADAM metallopeptidase with thrombospondin type 1 motif, 9.
   
  
 0.619
atxn7
Ataxin 7.
      
 0.601
grb2
Growth factor receptor-bound protein 2b.
    
  0.598
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
  0.596
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.