STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsph3Radial spoke head 3. (344 aa)    
Predicted Functional Partners:
ing3
Inhibitor of growth protein.
    
   0.933
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.933
Nanp
N-acetylneuraminic acid phosphatase.
   
   0.933
wtap
WT1 associated protein.
    
   0.933
LOC100707731
Radial spoke head component 4A.
  
 
 0.886
LOC100703700
Dystrobrevin.
    
   0.828
LOC100702539
Dystrobrevin.
    
   0.828
dtna
Dystrobrevin.
    
   0.828
rsph9
Radial spoke head 9 homolog.
  
 
 0.823
ENSONIP00000070007
Dystrobrevin beta-like.
    
   0.744
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.