STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
anxa3Annexin. (353 aa)    
Predicted Functional Partners:
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
    
 0.494
sar1b
Secretion associated Ras related GTPase 1B.
      
 0.480
itpka
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.480
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
      
 0.480
lcat
Lecithin-cholesterol acyltransferase.
      
 0.461
I3K2U1_ORENI
RAB3 GTPase activating protein subunit 2 (non-catalytic).
      
 0.461
LOC100695535
Phospholipase A2, group XV.
      
 0.461
ttc13
Tetratricopeptide repeat domain 13.
     
 0.428
LOC100702996
Tyrosine hydroxylase 2.
      
 0.425
trim54
Tripartite motif containing 54.
    
 0.410
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.