STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap161Cilia- and flagella-associated protein 161. (298 aa)    
Predicted Functional Partners:
efhc2
EF-hand domain (C-terminal) containing 2.
   
 
 0.750
Mns1
Meiosis-specific nuclear structural 1.
    
 0.684
Cfap126
Protein Flattop.
   
 
 0.677
Efhc1
EF-hand domain (C-terminal) containing 1.
   
 
 0.667
lg22h5orf49
Si:dkeyp-46h3.1.
   
 
 0.658
Lg12h9orf116
UPF0691 protein C9orf116 homolog.
   
 
 0.652
ENSONIP00000056453
annotation not available
   
 
 0.652
I3K3K8_ORENI
Coiled-coil domain containing 28A.
   
    0.628
cfap45
Cilia and flagella associated protein 45.
   
 
 0.625
dlec1
DLEC1 cilia and flagella associated protein.
   
 0.625
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.