STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100699297Nuclear receptor binding protein 1. (534 aa)    
Predicted Functional Partners:
gpr6
G protein-coupled receptor 6; Belongs to the G-protein coupled receptor 1 family.
      
 0.695
foxo4
Forkhead box O4.
      
 0.691
TSC22D2
TSC22 domain family protein 2 isoform X3.
    
 
 0.629
I3JX81_ORENI
Uncharacterized protein.
    
 
 0.629
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 
 0.534
I3JIW9_ORENI
Uncharacterized protein.
    
 
 0.496
I3JU14_ORENI
Elongin B.
    
 
 0.478
elob
Ubiquitin-like domain-containing protein.
    
 
 0.478
TSC22D1
Uncharacterized protein.
    
 
 0.430
I3K3M0_ORENI
Uncharacterized protein.
    
 
 0.430
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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