STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697226Mitochondrial ribosomal protein L23. (154 aa)    
Predicted Functional Partners:
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.998
mrpl15
Mitochondrial ribosomal protein L15.
   
 
 0.997
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.997
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.997
mrpl13
39S ribosomal protein L13, mitochondrial.
   
 
 0.997
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.996
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.996
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.995
mrpl30
Mitochondrial ribosomal protein L30.
   
   0.995
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.995
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.