STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKS1AAnkyrin repeat and sterile alpha motif domain containing 1A. (1151 aa)    
Predicted Functional Partners:
LOC100693369
Fras1 related extracellular matrix 1b.
   
  0.606
frem1
Fras1 related extracellular matrix 1a.
   
  0.606
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.510
LOC100693503
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.510
bag4
BCL2 associated athanogene 4.
   
   0.507
srp19
Signal recognition particle 19.
   
    0.499
Rin1
Si:ch211-168d1.3.
    
 0.461
Arnt2
Aryl-hydrocarbon receptor nuclear translocator 2.
    
 
 0.431
Vwa8
Von Willebrand factor A domain containing 8.
   
 0.423
bag3
BCL2 associated athanogene 3.
   
  0.417
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.