STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d17TBC1 domain family, member 17. (694 aa)    
Predicted Functional Partners:
LOC100696865
Uncharacterized protein.
    
 0.650
LOC102076290
Ras-related protein Rab-7A.
    
 0.650
I3JY07_ORENI
GABA(A) receptor-associated protein like 2.
   
 0.616
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.616
gabarap
Gamma-aminobutyric acid receptor-associated protein.
   
 0.616
Armc5
Armadillo repeat containing 5.
   
 0.579
I3KWS8_ORENI
Si:dkey-13a21.4.
   
 0.579
LOC100697336
RAB9B, member RAS oncogene family.
   
 0.579
RAB9A
RAB9A, member RAS oncogene family.
   
 0.579
LOC100700420
Uncharacterized protein.
   
 0.579
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.