STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000064706annotation not available (92 aa)    
Predicted Functional Partners:
LOC100702930
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
   
 0.783
LOC100699679
H2A histone family, member Y; Belongs to the histone H2A family.
   
 0.783
hat1
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
    
 0.770
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.761
LOC100706645
Histone H2A; Belongs to the histone H2A family.
   
 0.749
LOC100694115
Histone H2A.Z.
   
 0.749
I3K2A8_ORENI
Lysine (K)-specific demethylase 6A, like.
    
 0.726
Kdm6b
Lysine-specific demethylase 6B.
    
 0.726
I3KVD8_ORENI
Lysine (K)-specific demethylase 6B, a.
    
 0.726
LOC100699848
Lysine (K)-specific demethylase 6B, b.
    
 0.726
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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