STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100695160Ankyrin repeat domain 34Ba. (534 aa)    
Predicted Functional Partners:
LOC100709637
Uncharacterized protein.
  
     0.501
ift81
Intraflagellar transport 81 homolog.
    
 0.500
asb15
Ankyrin repeat and SOCS box containing 15b.
  
     0.493
LOC109194384
Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4).
  
     0.486
mtpn
Myotrophin.
  
     0.486
ENSONIP00000061701
Ankyrin repeat and SOCS box protein 5 isoform X2.
  
     0.484
LOC100706466
Ankyrin repeat and SOCS box containing 13b.
  
     0.483
Ankrd6
Ankyrin repeat domain 6b.
  
     0.481
LOC100709444
Uncharacterized protein.
  
     0.478
LOC100700369
Ankyrin repeat domain 39.
  
     0.474
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.