STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109198956Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (184 aa)    
Predicted Functional Partners:
ptges
Prostaglandin E synthase.
   
 
 0.913
ptges2
Prostaglandin E synthase 2-like; Belongs to the GST superfamily.
     
 0.911
ptgs2
Prostaglandin-endoperoxide synthase 2b.
     
 0.908
LOC100704884
Prostaglandin E synthase 3a (cytosolic).
     
 0.907
LOC100706085
Cytosolic prostaglandin-E synthase.
     
 0.907
LOC100699955
Prostaglandin-endoperoxide synthase 1.
     
 0.907
LOC100712094
Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family.
  
  
 
0.904
LOC100703351
Prostaglandin I2 (prostacyclin) synthase; Belongs to the cytochrome P450 family.
     
 0.902
LOC100693506
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.902
ptgdsl2
Putative prostaglandin D synthase; Belongs to the calycin superfamily. Lipocalin family.
  
  
 
0.901
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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