STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710693Uncharacterized protein. (938 aa)    
Predicted Functional Partners:
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.617
I3K585_ORENI
Coagulation factor XIII, A1 polypeptide b.
   
 
  0.525
f13a1
TGc domain-containing protein.
   
 
  0.525
LOC100709003
Complement component c3b, tandem duplicate 2.
  
 
  0.505
Zbtb41
Zinc finger and BTB domain containing 41.
    
 0.453
LOC100702313
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
  0.415
LOC100703919
Uncharacterized protein.
    
  0.404
LOC100704190
Uncharacterized protein.
    
  0.404
I3KHS6_ORENI
Uncharacterized protein.
    
  0.404
I3KHV5_ORENI
Uncharacterized protein.
    
  0.404
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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