STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll1Tubulin tyrosine ligase-like family, member 1. (424 aa)    
Predicted Functional Partners:
Tpgs2
Tubulin polyglutamylase complex subunit 2.
   
 0.851
LOC100699738
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
    
 
 0.806
edc3
Uncharacterized protein.
    
 
 0.806
nicn1
Nicolin 1.
   
 0.806
tpgs1
Uncharacterized protein.
    
 0.801
lrrc49
Leucine-rich repeat-containing protein 49 isoform X1.
    
 0.773
ENSONIP00000061924
Leucine-rich repeat-containing protein 49.
    
 0.773
tbc1d19
TBC1 domain family, member 19.
   
 
 0.718
lg7h11orf49
Zgc:92873.
    
 
 0.681
dcp2
M7GpppN-mRNA hydrolase isoform X1.
    
 
 0.601
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.