Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| I3KDC7_ORENI | nr0b2 | ENSONIP00000019122 | ENSONIP00000067688 | cAMP responsive element binding protein 3-like 3 like. | Orphan nuclear receptor SHP. | 0.687 |
| LOC100690728 | LOC100699579 | ENSONIP00000026925 | ENSONIP00000033711 | Hepatocyte nuclear factor 4, gamma. | Nuclear receptor subfamily 1, group H, member 5. | 0.413 |
| LOC100690728 | med1 | ENSONIP00000026925 | ENSONIP00000038435 | Hepatocyte nuclear factor 4, gamma. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.674 |
| LOC100690728 | nr0b2 | ENSONIP00000026925 | ENSONIP00000067688 | Hepatocyte nuclear factor 4, gamma. | Orphan nuclear receptor SHP. | 0.722 |
| LOC100690728 | nr1h4 | ENSONIP00000026925 | ENSONIP00000037241 | Hepatocyte nuclear factor 4, gamma. | Nuclear receptor subfamily 1, group H, member 4. | 0.413 |
| LOC100699579 | LOC100690728 | ENSONIP00000033711 | ENSONIP00000026925 | Nuclear receptor subfamily 1, group H, member 5. | Hepatocyte nuclear factor 4, gamma. | 0.413 |
| LOC100699579 | hnf4a | ENSONIP00000033711 | ENSONIP00000080954 | Nuclear receptor subfamily 1, group H, member 5. | Hepatocyte nuclear factor 4, alpha. | 0.413 |
| LOC100699579 | med1 | ENSONIP00000033711 | ENSONIP00000038435 | Nuclear receptor subfamily 1, group H, member 5. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.803 |
| LOC100699579 | nr0b2 | ENSONIP00000033711 | ENSONIP00000067688 | Nuclear receptor subfamily 1, group H, member 5. | Orphan nuclear receptor SHP. | 0.682 |
| LOC100699579 | nr5a2 | ENSONIP00000033711 | ENSONIP00000077495 | Nuclear receptor subfamily 1, group H, member 5. | Nuclear receptor subfamily 5, group A, member 2. | 0.422 |
| LOC100699579 | sf-1 | ENSONIP00000033711 | ENSONIP00000025473 | Nuclear receptor subfamily 1, group H, member 5. | SF-1/Ad4BP. | 0.422 |
| PPARA | med1 | ENSONIP00000072773 | ENSONIP00000038435 | Peroxisome proliferator-activated receptor alpha b. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.897 |
| PPARA | nr0b2 | ENSONIP00000072773 | ENSONIP00000067688 | Peroxisome proliferator-activated receptor alpha b. | Orphan nuclear receptor SHP. | 0.680 |
| hnf4a | LOC100699579 | ENSONIP00000080954 | ENSONIP00000033711 | Hepatocyte nuclear factor 4, alpha. | Nuclear receptor subfamily 1, group H, member 5. | 0.413 |
| hnf4a | med1 | ENSONIP00000080954 | ENSONIP00000038435 | Hepatocyte nuclear factor 4, alpha. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.674 |
| hnf4a | nr0b2 | ENSONIP00000080954 | ENSONIP00000067688 | Hepatocyte nuclear factor 4, alpha. | Orphan nuclear receptor SHP. | 0.722 |
| hnf4a | nr1h4 | ENSONIP00000080954 | ENSONIP00000037241 | Hepatocyte nuclear factor 4, alpha. | Nuclear receptor subfamily 1, group H, member 4. | 0.413 |
| med1 | LOC100690728 | ENSONIP00000038435 | ENSONIP00000026925 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Hepatocyte nuclear factor 4, gamma. | 0.674 |
| med1 | LOC100699579 | ENSONIP00000038435 | ENSONIP00000033711 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor subfamily 1, group H, member 5. | 0.803 |
| med1 | PPARA | ENSONIP00000038435 | ENSONIP00000072773 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Peroxisome proliferator-activated receptor alpha b. | 0.897 |
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