stard13 protein (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

stard13

Uncharacterized protein. (1409 aa)

Predicted Functional Partners:

LOC100701985

0.580

LOC100692088

0.580

rasa1

0.579

cdc42

0.547

TNS3

0.524

TNS3-2

0.524

Tns1

0.524

TNS1

0.524

LOC100694803

0.503

LOC100693083

0.503

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100692088	stard13	ENSONIP00000068661	ENSONIP00000068483	Tensin 2a.	Uncharacterized protein.	0.580
LOC100693083	cdc42	ENSONIP00000015456	ENSONIP00000037546	Uncharacterized protein.	Cell division cycle 42.	0.483
LOC100693083	rasa1	ENSONIP00000015456	ENSONIP00000043746	Uncharacterized protein.	RAS p21 protein activator (GTPase activating protein) 1a.	0.403
LOC100693083	stard13	ENSONIP00000015456	ENSONIP00000068483	Uncharacterized protein.	Uncharacterized protein.	0.503
LOC100694803	cdc42	ENSONIP00000002091	ENSONIP00000037546	Ras homolog family member Cb.	Cell division cycle 42.	0.483
LOC100694803	rasa1	ENSONIP00000002091	ENSONIP00000043746	Ras homolog family member Cb.	RAS p21 protein activator (GTPase activating protein) 1a.	0.403
LOC100694803	stard13	ENSONIP00000002091	ENSONIP00000068483	Ras homolog family member Cb.	Uncharacterized protein.	0.503
LOC100701985	stard13	ENSONIP00000024394	ENSONIP00000068483	Tensin 2b.	Uncharacterized protein.	0.580
TNS1	stard13	ENSONIP00000043301	ENSONIP00000068483	Tensin 1.	Uncharacterized protein.	0.524
TNS3	stard13	ENSONIP00000008011	ENSONIP00000068483	Tensin-3 isoform X1.	Uncharacterized protein.	0.524
TNS3-2	stard13	ENSONIP00000012152	ENSONIP00000068483	Tensin 3.	Uncharacterized protein.	0.524
Tns1	stard13	ENSONIP00000042660	ENSONIP00000068483	Tensin 1b.	Uncharacterized protein.	0.524
cdc42	LOC100693083	ENSONIP00000037546	ENSONIP00000015456	Cell division cycle 42.	Uncharacterized protein.	0.483
cdc42	LOC100694803	ENSONIP00000037546	ENSONIP00000002091	Cell division cycle 42.	Ras homolog family member Cb.	0.483
cdc42	rasa1	ENSONIP00000037546	ENSONIP00000043746	Cell division cycle 42.	RAS p21 protein activator (GTPase activating protein) 1a.	0.674
cdc42	stard13	ENSONIP00000037546	ENSONIP00000068483	Cell division cycle 42.	Uncharacterized protein.	0.547
rasa1	LOC100693083	ENSONIP00000043746	ENSONIP00000015456	RAS p21 protein activator (GTPase activating protein) 1a.	Uncharacterized protein.	0.403
rasa1	LOC100694803	ENSONIP00000043746	ENSONIP00000002091	RAS p21 protein activator (GTPase activating protein) 1a.	Ras homolog family member Cb.	0.403
rasa1	cdc42	ENSONIP00000043746	ENSONIP00000037546	RAS p21 protein activator (GTPase activating protein) 1a.	Cell division cycle 42.	0.674
rasa1	stard13	ENSONIP00000043746	ENSONIP00000068483	RAS p21 protein activator (GTPase activating protein) 1a.	Uncharacterized protein.	0.579