STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnai1Dynein, axonemal, intermediate chain 1, paralog 2. (697 aa)    
Predicted Functional Partners:
LOC100707731
Radial spoke head component 4A.
  
  
 0.853
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.797
dctn2
Dynactin 2 (p50).
    
 0.795
I3KLD1_ORENI
Dynein, axonemal, heavy chain 12.
  
 0.755
dnal4
Dynein light chain 4, axonemal.
    
 0.753
dnah7
Dynein, axonemal, heavy chain 7.
  
 0.749
ENSONIP00000029971
annotation not available
  
 0.738
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.721
dctn3
Dynactin 3 (p22).
    
 0.721
dnaaf1
Dynein assembly factor 1, axonemal.
  
 
 
 0.717
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.