STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102077463Hematopoietic progenitor cell antigen CD34. (342 aa)    
Predicted Functional Partners:
LOC100709183
Uncharacterized protein.
  
   
 0.745
I3KB63_ORENI
Link domain-containing protein.
      
 0.664
LOC100711438
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.613
kitlg
Kit ligand a.
      
 0.594
ptprc
Protein tyrosine phosphatase receptor type C.
      
 0.590
Fah
Fumarylacetoacetase.
      
 0.583
ENSONIP00000067297
annotation not available
      
 0.581
cd79a
CD79a molecule, immunoglobulin-associated alpha.
      
 0.580
I3KX32_ORENI
Ig-like domain-containing protein.
      
 0.575
LOC100707843
Platelet/endothelial cell adhesion molecule 1.
   
  
 0.557
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.