STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep126Centrosomal protein of 126 kDa isoform X1. (1012 aa)    
Predicted Functional Partners:
Topaz1
Protein TOPAZ1 isoform X3.
  
 
 
 0.646
LOC100694613
C2H2-type domain-containing protein.
      
 0.589
I3J0S6_ORENI
Sterile alpha motif domain containing 1a.
  
 
  0.530
ccdc13
Coiled-coil domain containing 13.
      
 0.512
ccdc18
Coiled-coil domain containing 18.
      
 0.505
CCDC66
Coiled-coil domain-containing protein 66 isoform X1.
  
 
 
 0.499
Atrip
Uncharacterized protein.
  
     0.493
sdccag8
Serologically defined colon cancer antigen 8.
    
 0.479
ap4e1
Adaptor related protein complex 4 subunit epsilon 1.
    
 0.477
scaper
S-phase cyclin A-associated protein in the ER.
      
 0.472
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.