STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lasp1LIM and SH3 protein 1. (235 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
      
 0.705
LOC100695916
Elastase 2; Belongs to the peptidase S1 family.
      
 0.704
LOC100697449
Zgc:112285; Belongs to the peptidase S1 family.
      
 0.635
LOC100710041
Ribonucleotide reductase M2 b.
      
 0.631
I3KRC2_ORENI
Uncharacterized protein.
      
 0.620
RRM2
Ribonucleotide reductase regulatory subunit M2.
      
 0.620
LOC100711807
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.586
LOC100694176
Elastase 3 like; Belongs to the peptidase S1 family.
      
 0.528
LOC100699645
Protein phosphatase 1, regulatory (inhibitor) subunit 1B.
      
 0.485
fpgt
Fucose-1-phosphate guanylyltransferase.
      
 0.477
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.