STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO46F-box protein 46. (777 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.635
cul1
Cullin 1b; Belongs to the cullin family.
    
 
 0.624
LOC100709988
Ankyrin repeat and SOCS box containing 13a, tandem duplicate 1.
      
 0.592
crh
Corticotropin releasing hormone b.
    
 0.555
ucn
Urotensin 1.
    
 0.555
ADCYAP1
Adenylate cyclase activating polypeptide 1a.
    
 0.533
LOC100708397
Pituitary adenylate cyclase-activating peptide.
    
 0.533
LOC100706976
Receptor activity modifying protein 3.
    
 0.498
Twistnb
Uncharacterized protein.
      
 0.489
klhl29
Kelch-like family member 29.
      
 0.489
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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