STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bub1BUB1 mitotic checkpoint serine/threonine kinase. (1266 aa)    
Predicted Functional Partners:
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.999
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
0.998
bub3
BUB3 mitotic checkpoint protein.
   
 0.997
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.995
Ndc80
NDC80 kinetochore complex component.
   
 0.994
cdc20
Cell division cycle 20 homolog.
   
 0.992
nek2
NIMA-related kinase 2.
   
 0.987
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.986
ENSONIP00000057827
Cell division cycle protein 20 homolog B isoform X1.
   
 0.985
ttk
Ttk protein kinase.
   
 
 0.981
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.