STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JD07_ORENIBTB (POZ) domain containing 17b. (484 aa)    
Predicted Functional Partners:
bbs9
Bardet-Biedl syndrome 9.
    
 0.540
fev
FEV transcription factor, ETS family member.
    
 
 0.499
bbs7
Bardet-Biedl syndrome 7.
    
 0.494
ttc8
Tetratricopeptide repeat domain 8.
    
 0.487
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.482
ano8
Anoctamin.
      
 0.477
LOC100696049
Anoctamin.
      
 0.477
ttc13
Tetratricopeptide repeat domain 13.
    
 0.476
LOC100697176
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
      
 0.453
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
      
 0.453
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.