STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syce3Synaptonemal complex central element protein 3. (97 aa)    
Predicted Functional Partners:
Syce1
Synaptonemal complex central element protein 1 isoform X1.
    
 0.949
ENSONIP00000056143
Uncharacterized protein LOC106098869 isoform X1.
    
 0.869
sycp3
Synaptonemal complex protein 3.
     
 0.670
smc3
Structural maintenance of chromosomes protein.
     
 0.651
ENSONIP00000064131
annotation not available
      
 0.583
spata22
Uncharacterized protein.
      
 0.577
meiob
Methionine sulfoxide reductase B1b.
      
 0.483
LOC100711062
HORMA domain-containing protein 1.
      
 0.476
LOC100704892
HORMA domain containing 1.
      
 0.476
ENSONIP00000058529
Selenoprotein W, 2a.
      
 0.463
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.