STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cplane2Ciliogenesis and planar polarity effector 2. (250 aa)    
Predicted Functional Partners:
ENSONIP00000000682
Intersectin 2a.
    
 0.821
I3KKD0_ORENI
Intersectin 2b.
    
 0.821
wdpcp
WD repeat containing planar cell polarity effector.
    
 
 0.799
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.728
arl13b
ADP-ribosylation factor-like 13b.
    
 0.697
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
     
 0.689
intu
Inturned planar cell polarity protein.
    
 0.676
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
      
 0.668
rab23
RAB23, member RAS oncogene family.
    
 0.667
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.616
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.