STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyroxd1Pyridine nucleotide-disulphide oxidoreductase domain 1. (501 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
   
 0.762
FDX1
Ferredoxin 1.
  
 0.738
fdx2
Ferredoxin 2.
  
 0.738
dao
D-amino-acid oxidase, tandem duplicate 2.
  
 0.712
Pipox
Pipecolic acid oxidase.
  
 0.712
LOC100692168
Immunoresponsive gene 1, like.
  
 0.712
acod1
Aconitate decarboxylase 1.
  
 0.712
ddo
Zgc:172341.
  
 0.712
uprt
Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).
  
   0.708
LOC100702604
Zgc:92275.
  
 
 0.686
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.