STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lg22h5orf49Si:dkeyp-46h3.1. (137 aa)    
Predicted Functional Partners:
Lg12h9orf116
UPF0691 protein C9orf116 homolog.
    
 
 0.851
lg20h1orf194
Uncharacterized protein.
  
   0.685
ENSONIP00000056453
annotation not available
    
 
 0.658
cfap161
Cilia- and flagella-associated protein 161.
   
 
 0.658
dpt
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
 
 0.640
I3KAM4_ORENI
Armadillo repeat containing 3.
   
  
 0.623
I3J1N4_ORENI
EF-hand calcium binding domain 1.
    
 
 0.618
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
      
 0.595
Cfap126
Protein Flattop.
   
   0.589
ENSONIP00000037202
annotation not available
      
 0.585
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.