STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slmapSarcolemma associated protein a. (901 aa)    
Predicted Functional Partners:
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.922
LOC100701317
MOB family member 4, phocein.
    
 
 0.907
LOC100697497
Programmed cell death 10a.
   
 
 0.875
LOC100709687
Programmed cell death 10b.
   
 
 0.875
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.873
strip1
Striatin interacting protein 1.
    
 
 0.854
I3KIZ1_ORENI
Striatin interacting protein 2.
    
 
 0.854
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.759
LOC100710281
Serine/threonine-protein phosphatase.
    
 
 0.754
LOC100705713
Serine/threonine-protein phosphatase.
    
 
 0.754
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.