STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000078060annotation not available (147 aa)    
Predicted Functional Partners:
brcc3
BRCA1/BRCA2-containing complex, subunit 3.
    
 0.566
babam2
BRISC and BRCA1 A complex member 2.
    
 0.566
babam1
BRISC and BRCA1 A complex member 1.
    
 0.564
brca1
Uncharacterized protein.
    
 0.506
ENSONIP00000059812
annotation not available
  
     0.486
ENSONIP00000076524
annotation not available
  
     0.486
bard1
BRCA1 associated RING domain 1.
    
 0.435
rps27a
Ribosomal protein S27a.
    
  0.427
ENSONIP00000074697
annotation not available
  
     0.422
ENSONIP00000047919
Ubiquitin B.
    
  0.416
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.