STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100703333ADNP homeobox 2b. (992 aa)    
Predicted Functional Partners:
rrp36
Ribosomal RNA processing 36.
      
 0.593
ahctf1
Protein ELYS.
      
 0.580
znf407
Zinc finger protein 407.
   
  
 0.526
ctdp1
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
   
  
 0.494
CDYL2
Chromodomain Y like 2.
   
 
 0.463
cdyl
Chromodomain protein, Y-like.
   
 
 0.463
znf280d
Zinc finger protein 280D.
      
 0.452
ENSONIP00000043233
Retinoic acid induced 1.
  
     0.438
Tsn
Translin.
      
 0.434
lepr
Uncharacterized protein.
  
     0.431
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.