STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100698156Amino acid transporter. (563 aa)    
Predicted Functional Partners:
Slc3a1
Solute carrier family 3 member 1.
   
 
 0.601
LOC100692028
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
  
 0.567
LOC100691459
Solute carrier family 15 member 1a.
   
 
 0.564
slc7a9
Solute carrier family 7 member 9.
   
  
 0.538
gng3
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.506
LOC100693734
Solute carrier family 38 member 4.
    
 
 0.506
LOC100690844
Solute carrier family 7 member 7.
   
  
 0.493
stmn4
Stathmin; Belongs to the stathmin family.
   
 
 0.475
SLC2A6
Solute carrier family 2 member 6; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.474
SNTA1
Syntrophin alpha 1.
      
 0.472
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.