STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000078893annotation not available (339 aa)    
Predicted Functional Partners:
CDYL2
Chromodomain Y like 2.
   
 0.530
cdyl
Chromodomain protein, Y-like.
   
 0.530
eed
Embryonic ectoderm development.
    
 0.503
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.467
rbbp5
Retinoblastoma binding protein 5.
    
 0.466
mphosph8
M-phase phosphoprotein 8.
    
 0.448
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.437
suz12
SUZ12 polycomb repressive complex 2 subunit b.
    
 0.417
LOC100701898
VEFS-Box domain-containing protein.
    
 0.417
I3K2A8_ORENI
Lysine (K)-specific demethylase 6A, like.
    
 0.403
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.