STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100695535Phospholipase A2, group XV. (417 aa)    
Predicted Functional Partners:
LOC100698638
Patatin-like phospholipase domain containing 7b.
     
 0.929
LOC100705489
Patatin-like phospholipase domain-containing protein 7 isoform X1.
     
 0.929
pnpla6
Patatin-like phospholipase domain containing 6.
     
 0.921
lypla1
Lysophospholipase 1.
     
 0.917
lcat
Lecithin-cholesterol acyltransferase.
  
  
0.905
LOC100698203
Phospholipase A(2).
     
 0.791
pla2g4a
Phospholipase A2.
   
 
 0.790
LOC100708634
Apolipoprotein A-Ib.
   
 0.780
LOC100702365
Uncharacterized protein.
   
 
 0.773
LOC100711490
Uncharacterized protein.
   
 0.771
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.