STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VANGL1Vang-like protein. (540 aa)    
Predicted Functional Partners:
dvl2
Dishevelled segment polarity protein 2.
    
 0.979
PRICKLE1
Prickle homolog 1a.
    
 0.977
prickle2
Prickle homolog 2b.
    
 0.977
LOC100696241
Prickle homolog 2a.
    
 0.976
LOC100708913
Prickle homolog 1b.
    
 0.974
dvl1
Dishevelled segment polarity protein 1a.
    
 0.973
LOC100700965
Dishevelled segment polarity protein 3a.
    
 0.969
I3KKZ9_ORENI
Uncharacterized protein.
    
 0.969
fzd6
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.707
I3KJ97_ORENI
Prickle homolog 3.
    
 0.675
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.