STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JB77_ORENIATP-binding cassette, sub-family A (ABC1), member 4a. (2308 aa)    
Predicted Functional Partners:
I3KQB3_ORENI
ATP-binding cassette, sub-family A (ABC1), member 4b.
  
  
 
0.901
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.653
LOC100711490
Uncharacterized protein.
   
 0.580
apoa4b
Putative apolipoprotein A4b.
   
 0.580
LOC100708634
Apolipoprotein A-Ib.
    
 0.521
LOC100699579
Nuclear receptor subfamily 1, group H, member 5.
    
 0.476
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.476
I3JST3_ORENI
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.448
LOC100691901
Uncharacterized protein LOC100691901.
     
 0.427
I3J408_ORENI
Retinoid x receptor, beta b.
    
 0.411
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.