STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fermt1Fermitin family member 1. (700 aa)    
Predicted Functional Partners:
fblim1
Filamin binding LIM protein 1.
    
 0.788
LOC100701917
Uncharacterized protein.
   
 
 0.725
ILK
Integrin linked kinase.
   
 
 0.725
Zfyve9
Zinc finger, FYVE domain containing 9a.
      
 0.715
ptgfr
Prostaglandin F receptor (FP); Belongs to the G-protein coupled receptor 1 family.
      
 0.707
trip6
Uncharacterized protein.
    
 0.686
LOC100694679
LIM domain containing preferred translocation partner in lipoma.
    
 0.686
LOC100707272
Iroquois homeobox 1a.
   
  
 0.591
LOC100692620
LIM domain-containing protein.
   
 
 0.574
LOC100698578
LIM domain-containing protein.
   
 
 0.574
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.