STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100698024Robl_LC7 domain-containing protein. (162 aa)    
Predicted Functional Partners:
tctex1d2
Tctex1 domain containing 2.
  
 0.858
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.850
wdr34
WD repeat domain 34.
   
 0.819
Wdr60
WD repeat domain 60.
   
 0.801
dnal4
Dynein light chain 4, axonemal.
   
 0.792
LOC100698873
Dynein light chain.
   
 0.775
LOC100705329
Dynein light chain 2, cytoplasmic.
   
 0.775
DYNLL2
Dynein light chain 2, cytoplasmic.
   
 0.775
LOC100691399
Tctex1 domain containing 1.
   
 0.734
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.725
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.