STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4119_0781FIG00674641: hypothetical protein. (223 aa)    
Predicted Functional Partners:
B4119_0780
FIG00674437: hypothetical protein.
 
     0.923
B4119_1278
FIG00674437: hypothetical protein.
 
     0.704
B4119_3760
Hypothetical protein; Carbon-nitrogen hydrolase.
 
     0.638
B4119_0746
Protein GerPF, required for proper assembly of spore coat, mutations lead to super-dormant spore.
  
     0.617
B4119_0782
Hypothetical protein.
       0.613
B4119_3169
FIG00673419: hypothetical protein.
  
     0.602
B4119_1601
Hypothetical protein.
  
     0.589
B4119_1999
BNR repeat domain protein.
  
     0.539
B4119_0752
Protein GerPF, required for proper assembly of spore coat, mutations lead to super-dormant spore.
  
     0.532
B4119_0747
Protein GerPE, required for proper assembly of spore coat, mutations lead to super-dormant spore.
  
     0.531
Your Current Organism:
Parageobacillus caldoxylosilyticus
NCBI taxonomy Id: 81408
Other names: ATCC 700356, Bacillus sp. BGSC W9A59, Bacillus sp. BGSC W9A68, DSM 12041, Geobacillus caldoxylosilyticus, Geobacillus caldoxylosilyticus (Ahmad et al. 2000) Fortina et al. 2001, NBRC 107762, P. caldoxylosilyticus, Saccharococcus caldoxylosilyticus, Saccharococcus caldoxylosilyticus Ahmad et al. 2000, strain S1812
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.