Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B4119_0868 | B4119_0869 | B4119_0868 | B4119_0869 | Adenylate cyclase. | FIG00673082: hypothetical protein; Belongs to the UPF0738 family. | 0.602 |
B4119_0868 | B4119_0870 | B4119_0868 | B4119_0870 | Adenylate cyclase. | GTP pyrophosphokinase. | 0.575 |
B4119_0868 | B4119_0872 | B4119_0868 | B4119_0872 | Adenylate cyclase. | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.529 |
B4119_0868 | ezrA | B4119_0868 | B4119_3206 | Adenylate cyclase. | Hypothetical protein; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.734 |
B4119_0868 | nadK | B4119_0868 | B4119_0871 | Adenylate cyclase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.681 |
B4119_0869 | B4119_0868 | B4119_0869 | B4119_0868 | FIG00673082: hypothetical protein; Belongs to the UPF0738 family. | Adenylate cyclase. | 0.602 |
B4119_0869 | B4119_0870 | B4119_0869 | B4119_0870 | FIG00673082: hypothetical protein; Belongs to the UPF0738 family. | GTP pyrophosphokinase. | 0.773 |
B4119_0869 | B4119_0872 | B4119_0869 | B4119_0872 | FIG00673082: hypothetical protein; Belongs to the UPF0738 family. | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.694 |
B4119_0869 | nadK | B4119_0869 | B4119_0871 | FIG00673082: hypothetical protein; Belongs to the UPF0738 family. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.793 |
B4119_0870 | B4119_0868 | B4119_0870 | B4119_0868 | GTP pyrophosphokinase. | Adenylate cyclase. | 0.575 |
B4119_0870 | B4119_0869 | B4119_0870 | B4119_0869 | GTP pyrophosphokinase. | FIG00673082: hypothetical protein; Belongs to the UPF0738 family. | 0.773 |
B4119_0870 | B4119_0872 | B4119_0870 | B4119_0872 | GTP pyrophosphokinase. | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.726 |
B4119_0870 | nadK | B4119_0870 | B4119_0871 | GTP pyrophosphokinase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.854 |
B4119_0872 | B4119_0868 | B4119_0872 | B4119_0868 | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Adenylate cyclase. | 0.529 |
B4119_0872 | B4119_0869 | B4119_0872 | B4119_0869 | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | FIG00673082: hypothetical protein; Belongs to the UPF0738 family. | 0.694 |
B4119_0872 | B4119_0870 | B4119_0872 | B4119_0870 | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | GTP pyrophosphokinase. | 0.726 |
B4119_0872 | nadK | B4119_0872 | B4119_0871 | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.711 |
cobB | cobB-2 | B4119_2035 | B4119_2366 | Hypothetical protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | Hypothetical protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | 0.818 |
cobB | nadD | B4119_2035 | B4119_2816 | Hypothetical protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.838 |
cobB | nadE | B4119_2035 | B4119_3072 | Hypothetical protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.832 |
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