STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4119_1006Hypothetical protein; Unspecified monosaccharide ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636); Belongs to the binding-protein-dependent transport system permease family. (348 aa)    
Predicted Functional Partners:
B4119_1007
Hypothetical protein; Unspecified monosaccharide ABC transport system, ATP-binding protein.
 
 
 0.998
B4119_1005
Hypothetical protein; Unspecified monosaccharide ABC transport system, permease component 2; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.994
B4119_1008
Hypothetical protein; Unspecified monosaccharide ABC transport system, substrate-binding component.
 
 
 0.962
B4119_1009
Hypothetical protein; CD4+ T cell-stimulating antigen, lipoprotein.
 
 
 0.955
B4119_0792
Basic membrane lipoprotein.
 
 
 0.917
B4119_0946
Hypothetical protein; Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1).
 
  
  0.819
B4119_1003
Hypothetical protein; FIG009210: peptidase, M16 family.
       0.559
B4119_1004
Hypothetical protein; FIG001621: Zinc protease.
       0.559
B4119_1002
3-oxoacyl-[acyl-carrier protein] reductase.
       0.503
B4119_1010
Hypothetical protein; Transcriptional regulator in cluster with Zn-dependent hydrolase.
       0.424
Your Current Organism:
Parageobacillus caldoxylosilyticus
NCBI taxonomy Id: 81408
Other names: ATCC 700356, Bacillus sp. BGSC W9A59, Bacillus sp. BGSC W9A68, DSM 12041, Geobacillus caldoxylosilyticus, Geobacillus caldoxylosilyticus (Ahmad et al. 2000) Fortina et al. 2001, NBRC 107762, P. caldoxylosilyticus, Saccharococcus caldoxylosilyticus, Saccharococcus caldoxylosilyticus Ahmad et al. 2000, strain S1812
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