STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4119_1263Quinone oxidoreductase. (324 aa)    
Predicted Functional Partners:
B4119_1973
Hypothetical protein.
  
 
 0.872
B4119_1905
PTS system, fructose-specific IIA component / PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component.
     
 0.822
B4119_2349
Hypothetical protein; PTS system HrsA EIIA component / PTS system HrsA EIIB component / PTS system HrsA permease IIC component.
     
 0.822
B4119_3733
PTS system, mannose-specific IIB component / PTS system, mannose-specific IIC component / PTS system, mannose-specific IIA component.
     
 0.822
B4119_3463
Enoyl-CoA hydratase [isoleucine degradation] / 3-hydroxyacyl-CoA dehydrogenase.
  
 0.807
B4119_1891
Pyruvate:ferredoxin oxidoreductase, gamma subunit / Pyruvate:ferredoxin oxidoreductase, delta subunit.
 
  
  0.778
B4119_0845
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 
 0.774
B4119_1265
Hypothetical protein; Predicted aminoglycoside phosphotransferase.
 
  0.762
B4119_1889
Pyruvate:ferredoxin oxidoreductase, alpha subunit / Pyruvate:ferredoxin oxidoreductase, beta subunit.
  
  
 0.761
B4119_0991
2-oxoglutarate oxidoreductase, alpha subunit.
     
 0.742
Your Current Organism:
Parageobacillus caldoxylosilyticus
NCBI taxonomy Id: 81408
Other names: ATCC 700356, Bacillus sp. BGSC W9A59, Bacillus sp. BGSC W9A68, DSM 12041, Geobacillus caldoxylosilyticus, Geobacillus caldoxylosilyticus (Ahmad et al. 2000) Fortina et al. 2001, NBRC 107762, P. caldoxylosilyticus, Saccharococcus caldoxylosilyticus, Saccharococcus caldoxylosilyticus Ahmad et al. 2000, strain S1812
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