STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4119_1486Hypothetical protein; Acetoin dehydrogenase E1 component alpha-subunit. (330 aa)    
Predicted Functional Partners:
B4119_1485
Hypothetical protein; Acetoin dehydrogenase E1 component beta-subunit.
 0.997
B4119_1571
Hypothetical protein; Acetoin dehydrogenase E1 component beta-subunit.
 0.993
B4119_3709
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
 0.991
B4119_1230
Pyruvate dehydrogenase E1 component beta subunit.
 0.990
B4119_2578
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
 0.990
B4119_1546
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
 0.987
B4119_1484
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex.
 
 0.940
B4119_2579
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex.
 
 0.785
B4119_3149
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.784
B4119_0991
2-oxoglutarate oxidoreductase, alpha subunit.
     
 0.755
Your Current Organism:
Parageobacillus caldoxylosilyticus
NCBI taxonomy Id: 81408
Other names: ATCC 700356, Bacillus sp. BGSC W9A59, Bacillus sp. BGSC W9A68, DSM 12041, Geobacillus caldoxylosilyticus, Geobacillus caldoxylosilyticus (Ahmad et al. 2000) Fortina et al. 2001, NBRC 107762, P. caldoxylosilyticus, Saccharococcus caldoxylosilyticus, Saccharococcus caldoxylosilyticus Ahmad et al. 2000, strain S1812
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