Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B4119_3203Small acid-soluble spore protein, alpha/beta family, SASP_1. (69 aa)    
Predicted Functional Partners:
B4119_0987
Outer spore coat protein E.
  
    0.743
B4119_2634
Stage V sporulation protein AF (SpoVAF).
  
     0.730
gpr
Endopeptidase spore protease Gpr; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.719
B4119_0241
Outer membrane lipoprotein receptor.
  
     0.710
B4119_0884
Stage V sporulation protein AC (SpoVAC).
  
    0.683
B4119_3788
Hypothetical protein; Spore cortex-lytic enzyme CwlJ.
  
    0.682
B4119_3787
Hypothetical protein; Alternate gene name: ipa-62r.
  
    0.680
B4119_0053
FIG007421: forespore shell protein.
  
     0.674
B4119_2552
Stage III sporulation protein AH.
  
   
 0.668
B4119_2893
Stage V sporulation protein AF (SpoVAF).
  
     0.648
Your Current Organism:
Parageobacillus caldoxylosilyticus
NCBI taxonomy Id: 81408
Other names: ATCC 700356, Bacillus sp. BGSC W9A59, Bacillus sp. BGSC W9A68, DSM 12041, Geobacillus caldoxylosilyticus, Geobacillus caldoxylosilyticus (Ahmad et al. 2000) Fortina et al. 2001, NBRC 107762, P. caldoxylosilyticus, Saccharococcus caldoxylosilyticus, Saccharococcus caldoxylosilyticus Ahmad et al. 2000, strain S1812
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.