STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4119_3419Hypothetical protein. (109 aa)    
Predicted Functional Partners:
B4119_3413
FIG00674322: hypothetical protein.
       0.773
B4119_3414
Hypothetical protein.
       0.773
B4119_3415
Hypothetical protein.
       0.773
B4119_3416
Dimeric dUTPase.
       0.773
B4119_3417
Hypothetical protein.
       0.773
B4119_3418
Hypothetical protein.
       0.773
B4119_3411
Hypothetical protein.
       0.741
B4119_3412
FIG00672614: hypothetical protein.
       0.741
B4119_3420
Hypothetical protein.
       0.510
B4119_3421
Hypothetical protein.
       0.488
Your Current Organism:
Parageobacillus caldoxylosilyticus
NCBI taxonomy Id: 81408
Other names: ATCC 700356, Bacillus sp. BGSC W9A59, Bacillus sp. BGSC W9A68, DSM 12041, Geobacillus caldoxylosilyticus, Geobacillus caldoxylosilyticus (Ahmad et al. 2000) Fortina et al. 2001, NBRC 107762, P. caldoxylosilyticus, Saccharococcus caldoxylosilyticus, Saccharococcus caldoxylosilyticus Ahmad et al. 2000, strain S1812
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.