Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B4119_1050 | B4119_1061 | B4119_1050 | B4119_1061 | Hypothetical protein; Signal transduction histidine kinase CheA. | Flagellar motor switch protein FliN. | 0.999 |
B4119_1050 | B4119_1062 | B4119_1050 | B4119_1062 | Hypothetical protein; Signal transduction histidine kinase CheA. | Flagellar motor switch protein FliM. | 0.982 |
B4119_1050 | B4119_3596 | B4119_1050 | B4119_3596 | Hypothetical protein; Signal transduction histidine kinase CheA. | Flagellar biosynthesis protein FliS. | 0.885 |
B4119_1050 | B4119_3597 | B4119_1050 | B4119_3597 | Hypothetical protein; Signal transduction histidine kinase CheA. | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.958 |
B4119_1050 | B4119_3598 | B4119_1050 | B4119_3598 | Hypothetical protein; Signal transduction histidine kinase CheA. | Flagellar protein FlaG. | 0.748 |
B4119_1050 | B4119_3620 | B4119_1050 | B4119_3620 | Hypothetical protein; Signal transduction histidine kinase CheA. | Flagellar biosynthesis protein FliS. | 0.865 |
B4119_1050 | fliW | B4119_1050 | B4119_3609 | Hypothetical protein; Signal transduction histidine kinase CheA. | Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.505 |
B4119_1061 | B4119_1050 | B4119_1061 | B4119_1050 | Flagellar motor switch protein FliN. | Hypothetical protein; Signal transduction histidine kinase CheA. | 0.999 |
B4119_1061 | B4119_1062 | B4119_1061 | B4119_1062 | Flagellar motor switch protein FliN. | Flagellar motor switch protein FliM. | 0.999 |
B4119_1061 | B4119_3595 | B4119_1061 | B4119_3595 | Flagellar motor switch protein FliN. | Flagellar protein fliT. | 0.735 |
B4119_1061 | B4119_3596 | B4119_1061 | B4119_3596 | Flagellar motor switch protein FliN. | Flagellar biosynthesis protein FliS. | 0.996 |
B4119_1061 | B4119_3597 | B4119_1061 | B4119_3597 | Flagellar motor switch protein FliN. | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.999 |
B4119_1061 | B4119_3598 | B4119_1061 | B4119_3598 | Flagellar motor switch protein FliN. | Flagellar protein FlaG. | 0.882 |
B4119_1061 | B4119_3620 | B4119_1061 | B4119_3620 | Flagellar motor switch protein FliN. | Flagellar biosynthesis protein FliS. | 0.993 |
B4119_1061 | fliW | B4119_1061 | B4119_3609 | Flagellar motor switch protein FliN. | Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.940 |
B4119_1062 | B4119_1050 | B4119_1062 | B4119_1050 | Flagellar motor switch protein FliM. | Hypothetical protein; Signal transduction histidine kinase CheA. | 0.982 |
B4119_1062 | B4119_1061 | B4119_1062 | B4119_1061 | Flagellar motor switch protein FliM. | Flagellar motor switch protein FliN. | 0.999 |
B4119_1062 | B4119_3595 | B4119_1062 | B4119_3595 | Flagellar motor switch protein FliM. | Flagellar protein fliT. | 0.487 |
B4119_1062 | B4119_3596 | B4119_1062 | B4119_3596 | Flagellar motor switch protein FliM. | Flagellar biosynthesis protein FliS. | 0.964 |
B4119_1062 | B4119_3597 | B4119_1062 | B4119_3597 | Flagellar motor switch protein FliM. | Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.976 |
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