STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4119_3766PTS system, glucose-specific IIA component. (166 aa)    
Predicted Functional Partners:
B4119_0355
PTS system, maltose and glucose-specific IIC component / PTS system, maltose and glucose-specific IIB component.
 0.999
B4119_2667
PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component.
 0.999
B4119_3768
PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component.
 0.999
B4119_1612
PTS system, N-acetylmuramic acid-specific IIB component / PTS system, N-acetylmuramic acid-specific IIC component.
 0.998
B4119_1780
PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component.
 0.998
B4119_1280
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 0.993
B4119_1282
PTS system, glucose-specific IIC component / PTS system, glucose-specific IIB component / PTS system, glucose-specific IIA component.
 
0.980
B4119_1281
Phosphocarrier protein of PTS system.
 
 0.923
B4119_1905
PTS system, fructose-specific IIA component / PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component.
   
 
 0.914
B4119_2349
Hypothetical protein; PTS system HrsA EIIA component / PTS system HrsA EIIB component / PTS system HrsA permease IIC component.
   
 
 0.914
Your Current Organism:
Parageobacillus caldoxylosilyticus
NCBI taxonomy Id: 81408
Other names: ATCC 700356, Bacillus sp. BGSC W9A59, Bacillus sp. BGSC W9A68, DSM 12041, Geobacillus caldoxylosilyticus, Geobacillus caldoxylosilyticus (Ahmad et al. 2000) Fortina et al. 2001, NBRC 107762, P. caldoxylosilyticus, Saccharococcus caldoxylosilyticus, Saccharococcus caldoxylosilyticus Ahmad et al. 2000, strain S1812
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