STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4119_3767Hypothetical protein; SacPA operon antiterminator. (277 aa)    
Predicted Functional Partners:
B4119_3768
PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component.
 
 0.905
B4119_3766
PTS system, glucose-specific IIA component.
 
 
 
 0.872
B4119_1282
PTS system, glucose-specific IIC component / PTS system, glucose-specific IIB component / PTS system, glucose-specific IIA component.
 
 
 0.851
B4119_1780
PTS system, trehalose-specific IIB component / PTS system, trehalose-specific IIC component.
 
 0.783
B4119_1612
PTS system, N-acetylmuramic acid-specific IIB component / PTS system, N-acetylmuramic acid-specific IIC component.
 
 0.744
B4119_2667
PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component.
 
 
 0.695
B4119_0355
PTS system, maltose and glucose-specific IIC component / PTS system, maltose and glucose-specific IIB component.
 
 
 0.693
B4119_3769
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
   
 0.661
B4119_0351
PTS system, glucose-specific IIA component.
 
 
 
 0.592
B4119_3733
PTS system, mannose-specific IIB component / PTS system, mannose-specific IIC component / PTS system, mannose-specific IIA component.
 
 
 0.531
Your Current Organism:
Parageobacillus caldoxylosilyticus
NCBI taxonomy Id: 81408
Other names: ATCC 700356, Bacillus sp. BGSC W9A59, Bacillus sp. BGSC W9A68, DSM 12041, Geobacillus caldoxylosilyticus, Geobacillus caldoxylosilyticus (Ahmad et al. 2000) Fortina et al. 2001, NBRC 107762, P. caldoxylosilyticus, Saccharococcus caldoxylosilyticus, Saccharococcus caldoxylosilyticus Ahmad et al. 2000, strain S1812
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