STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4119_3887Flagellar basal-body rod protein FlgF. (278 aa)    
Predicted Functional Partners:
B4119_1061
Flagellar motor switch protein FliN.
 
 
 0.996
B4119_1075
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
 0.996
B4119_1066
Hypothetical protein; Flagellar basal-body rod modification protein FlgD.
 
 
 0.991
fliE
Hypothetical protein; Flagellar hook-basal body complex protein FliE.
 
 
 0.991
B4119_3888
Flagellar basal-body rod protein FlgG.
 
 
 
0.988
B4119_1076
Hypothetical protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.978
B4119_1073
Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.975
B4119_1072
Flagellar motor switch protein FliG.
 
 
 0.974
fliQ
Hypothetical protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.970
flgK
Flagellar hook-associated protein FlgK.
 
  
 0.968
Your Current Organism:
Parageobacillus caldoxylosilyticus
NCBI taxonomy Id: 81408
Other names: ATCC 700356, Bacillus sp. BGSC W9A59, Bacillus sp. BGSC W9A68, DSM 12041, Geobacillus caldoxylosilyticus, Geobacillus caldoxylosilyticus (Ahmad et al. 2000) Fortina et al. 2001, NBRC 107762, P. caldoxylosilyticus, Saccharococcus caldoxylosilyticus, Saccharococcus caldoxylosilyticus Ahmad et al. 2000, strain S1812
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