Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
B4119_1576 | B4119_4262 | Hypothetical protein; Transcriptional regulator, TetR family. | Hypothetical protein. | 0.447 |
B4119_2428 | B4119_4009 | Hypothetical protein; Putative cupin. | Transposase IS4 family protein. | 0.709 |
B4119_2428 | B4119_4261 | Hypothetical protein; Putative cupin. | Hypothetical protein. | 0.450 |
B4119_2428 | B4119_4262 | Hypothetical protein; Putative cupin. | Hypothetical protein. | 0.497 |
B4119_3425 | B4119_4009 | Phage-related protein. | Transposase IS4 family protein. | 0.442 |
B4119_3425 | B4119_4262 | Phage-related protein. | Hypothetical protein. | 0.402 |
B4119_4009 | B4119_2428 | Transposase IS4 family protein. | Hypothetical protein; Putative cupin. | 0.709 |
B4119_4009 | B4119_3425 | Transposase IS4 family protein. | Phage-related protein. | 0.442 |
B4119_4009 | B4119_4163 | Transposase IS4 family protein. | Mobile element protein. | 0.534 |
B4119_4009 | B4119_4261 | Transposase IS4 family protein. | Hypothetical protein. | 0.438 |
B4119_4009 | B4119_4262 | Transposase IS4 family protein. | Hypothetical protein. | 0.445 |
B4119_4163 | B4119_4009 | Mobile element protein. | Transposase IS4 family protein. | 0.534 |
B4119_4163 | B4119_4262 | Mobile element protein. | Hypothetical protein. | 0.415 |
B4119_4261 | B4119_2428 | Hypothetical protein. | Hypothetical protein; Putative cupin. | 0.450 |
B4119_4261 | B4119_4009 | Hypothetical protein. | Transposase IS4 family protein. | 0.438 |
B4119_4261 | B4119_4262 | Hypothetical protein. | Hypothetical protein. | 0.807 |
B4119_4262 | B4119_1576 | Hypothetical protein. | Hypothetical protein; Transcriptional regulator, TetR family. | 0.447 |
B4119_4262 | B4119_2428 | Hypothetical protein. | Hypothetical protein; Putative cupin. | 0.497 |
B4119_4262 | B4119_3425 | Hypothetical protein. | Phage-related protein. | 0.402 |
B4119_4262 | B4119_4009 | Hypothetical protein. | Transposase IS4 family protein. | 0.445 |
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