Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SDZ91926.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (338 aa)    
Predicted Functional Partners:
SDZ91904.1
Peptide/nickel transport system substrate-binding protein.
 
 0.999
SDZ91952.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.999
SDZ91978.1
Peptide/nickel transport system permease protein.
 
 0.999
SDZ92002.1
Peptide/nickel transport system permease protein.
 0.999
SEA70839.1
ECF-type riboflavin transporter, S component.
  
 
 0.813
SEA70859.1
Energy-coupling factor transport system ATP-binding protein.
  
 
 0.813
SEA79849.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
    
 0.577
SDZ91883.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
       0.523
SDZ91854.1
Phosphinothricin acetyltransferase.
       0.459
Your Current Organism:
Eubacterium aggregans
NCBI taxonomy Id: 81409
Other names: DSM 12183, E. aggregans, Eubacterium aggregans Mechichi et al. 2000, strain SR12
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